Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rfx4Q7TNK1 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rfx4Q7TNK1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx4Q7TNK1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Gm9847-201ENSMUST00000052528 599 ntBASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rfx4Q7TNK1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx4Q7TNK1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx4Q7TNK1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms