Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cspg5Q71M36 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.54■□□□□ 0.56
Cspg5Q71M36 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Alkbh1-212ENSMUST00000185301 408 ntBASIC18.54■□□□□ 0.56
Cspg5Q71M36 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.54■□□□□ 0.56
Cspg5Q71M36 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Mtag2-201ENSMUST00000058665 714 ntBASIC18.53■□□□□ 0.56
Cspg5Q71M36 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cspg5Q71M36 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cspg5Q71M36 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cspg5Q71M36 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Cspg5Q71M36 Gm10819-201ENSMUST00000099988 561 ntBASIC18.52■□□□□ 0.56
Cspg5Q71M36 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cspg5Q71M36 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cspg5Q71M36 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cspg5Q71M36 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cspg5Q71M36 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cspg5Q71M36 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Gm11927-201ENSMUST00000118472 759 ntBASIC18.51■□□□□ 0.55
Cspg5Q71M36 Gm6433-201ENSMUST00000118634 875 ntBASIC18.51■□□□□ 0.55
Cspg5Q71M36 Gm10231-201ENSMUST00000181584 441 ntBASIC18.51■□□□□ 0.55
Cspg5Q71M36 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Gm10175-202ENSMUST00000208752 441 ntBASIC18.51■□□□□ 0.55
Cspg5Q71M36 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Cspg5Q71M36 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg5Q71M36 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.5■□□□□ 0.55
Cspg5Q71M36 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg5Q71M36 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg5Q71M36 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg5Q71M36 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg5Q71M36 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cspg5Q71M36 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Cspg5Q71M36 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms