Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Lsm8Q6ZWM4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm8Q6ZWM4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.83■□□□□ 0.6
Lsm8Q6ZWM4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm8Q6ZWM4 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm8Q6ZWM4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lsm8Q6ZWM4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Lsm8Q6ZWM4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lsm8Q6ZWM4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lsm8Q6ZWM4 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.8■□□□□ 0.6
Lsm8Q6ZWM4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Lsm8Q6ZWM4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Lsm8Q6ZWM4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.8■□□□□ 0.6
Lsm8Q6ZWM4 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm8Q6ZWM4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lsm8Q6ZWM4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lsm8Q6ZWM4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.8■□□□□ 0.6
Lsm8Q6ZWM4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm8Q6ZWM4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm8Q6ZWM4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.79■□□□□ 0.6
Lsm8Q6ZWM4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm8Q6ZWM4 Gm12896-201ENSMUST00000118430 226 ntBASIC18.79■□□□□ 0.6
Lsm8Q6ZWM4 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.79■□□□□ 0.6
Lsm8Q6ZWM4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm8Q6ZWM4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lsm8Q6ZWM4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Gm12441-201ENSMUST00000121806 588 ntBASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.78■□□□□ 0.6
Lsm8Q6ZWM4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Mir2861-201ENSMUST00000175539 82 ntBASIC18.77■□□□□ 0.6
Lsm8Q6ZWM4 Gm8969-201ENSMUST00000199694 526 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms