Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx58Q6Q899 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx58Q6Q899 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx58Q6Q899 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx58Q6Q899 Gm13836-201ENSMUST00000121159 501 ntBASIC22.22■■□□□ 1.15
Ddx58Q6Q899 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Ddx58Q6Q899 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC22.22■■□□□ 1.15
Ddx58Q6Q899 Gm3375-201ENSMUST00000203929 796 ntBASIC22.22■■□□□ 1.15
Ddx58Q6Q899 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ddx58Q6Q899 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ddx58Q6Q899 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx58Q6Q899 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx58Q6Q899 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx58Q6Q899 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx58Q6Q899 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx58Q6Q899 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx58Q6Q899 Gm38342-201ENSMUST00000195710 2980 ntBASIC22.21■■□□□ 1.15
Ddx58Q6Q899 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx58Q6Q899 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ddx58Q6Q899 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx58Q6Q899 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx58Q6Q899 Gm29994-201ENSMUST00000195495 1193 ntBASIC22.2■■□□□ 1.14
Ddx58Q6Q899 Otx2os1-204ENSMUST00000227221 751 ntBASIC22.2■■□□□ 1.14
Ddx58Q6Q899 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx58Q6Q899 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx58Q6Q899 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Ddx58Q6Q899 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ddx58Q6Q899 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC22.19■■□□□ 1.14
Ddx58Q6Q899 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ddx58Q6Q899 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Gm10517-202ENSMUST00000192970 758 ntBASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 AC153881.2-201ENSMUST00000214877 204 ntBASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Gm30025-201ENSMUST00000218555 728 ntBASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ddx58Q6Q899 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Gm10418-201ENSMUST00000100943 576 ntBASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Gm43799-201ENSMUST00000201845 579 ntBASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ddx58Q6Q899 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ddx58Q6Q899 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ddx58Q6Q899 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms