Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rif1Q6PR54 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rif1Q6PR54 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.11■□□□□ 0.01
Rif1Q6PR54 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.11■□□□□ 0.01
Rif1Q6PR54 Mir6349-201ENSMUST00000184059 97 ntBASIC15.11■□□□□ 0.01
Rif1Q6PR54 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Gm10418-201ENSMUST00000100943 576 ntBASIC15.11■□□□□ 0.01
Rif1Q6PR54 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rif1Q6PR54 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Gm1401-201ENSMUST00000122048 772 ntBASIC15.1■□□□□ 0.01
Rif1Q6PR54 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rif1Q6PR54 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rif1Q6PR54 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.09■□□□□ 0.01
Rif1Q6PR54 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.09■□□□□ 0.01
Rif1Q6PR54 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rif1Q6PR54 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rif1Q6PR54 Gm14822-201ENSMUST00000122247 291 ntBASIC15.08■□□□□ 0.01
Rif1Q6PR54 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rif1Q6PR54 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.08■□□□□ 0.01
Rif1Q6PR54 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.08■□□□□ 0.01
Rif1Q6PR54 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rif1Q6PR54 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rif1Q6PR54 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rif1Q6PR54 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rif1Q6PR54 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rif1Q6PR54 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.08■□□□□ 0
Rif1Q6PR54 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rif1Q6PR54 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rif1Q6PR54 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Rif1Q6PR54 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Rif1Q6PR54 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rif1Q6PR54 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rif1Q6PR54 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rif1Q6PR54 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.07■□□□□ 0
Rif1Q6PR54 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rif1Q6PR54 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rif1Q6PR54 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Rif1Q6PR54 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.07■□□□□ 0
Rif1Q6PR54 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rif1Q6PR54 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Rif1Q6PR54 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rif1Q6PR54 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rif1Q6PR54 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Rif1Q6PR54 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Rif1Q6PR54 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Rif1Q6PR54 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms