Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Gm2399-201ENSMUST00000104944 225 ntBASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarca1Q6PGB8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarca1Q6PGB8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Smarca1Q6PGB8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarca1Q6PGB8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarca1Q6PGB8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarca1Q6PGB8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarca1Q6PGB8 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.92■□□□□ 0.78
Smarca1Q6PGB8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.92■□□□□ 0.78
Smarca1Q6PGB8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.92■□□□□ 0.78
Smarca1Q6PGB8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Smarca1Q6PGB8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
Smarca1Q6PGB8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarca1Q6PGB8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarca1Q6PGB8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 Gm11249-201ENSMUST00000117071 859 ntBASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 Gm5643-201ENSMUST00000117081 966 ntBASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarca1Q6PGB8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Flg-201ENSMUST00000050758 1488 ntBASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarca1Q6PGB8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca1Q6PGB8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca1Q6PGB8 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca1Q6PGB8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.89■□□□□ 0.77
Smarca1Q6PGB8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.89■□□□□ 0.77
Smarca1Q6PGB8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.89■□□□□ 0.77
Smarca1Q6PGB8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.89■□□□□ 0.77
Smarca1Q6PGB8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
Smarca1Q6PGB8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.89■□□□□ 0.77
Smarca1Q6PGB8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca1Q6PGB8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarca1Q6PGB8 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.89■□□□□ 0.77
Smarca1Q6PGB8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca1Q6PGB8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca1Q6PGB8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca1Q6PGB8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca1Q6PGB8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.88■□□□□ 0.77
Smarca1Q6PGB8 Gm18666-201ENSMUST00000190039 958 ntBASIC19.88■□□□□ 0.77
Smarca1Q6PGB8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.88■□□□□ 0.77
Smarca1Q6PGB8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.88■□□□□ 0.77
Smarca1Q6PGB8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca1Q6PGB8 Gm10812-201ENSMUST00000099864 546 ntBASIC19.88■□□□□ 0.77
Smarca1Q6PGB8 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca1Q6PGB8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Smarca1Q6PGB8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms