Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nup98Q6PFD9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC21.29■■□□□ 1
Nup98Q6PFD9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nup98Q6PFD9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nup98Q6PFD9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nup98Q6PFD9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nup98Q6PFD9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Nup98Q6PFD9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Nup98Q6PFD9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.29■■□□□ 1
Nup98Q6PFD9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.29■■□□□ 1
Nup98Q6PFD9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nup98Q6PFD9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nup98Q6PFD9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Nup98Q6PFD9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Nup98Q6PFD9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Nup98Q6PFD9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nup98Q6PFD9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.28■■□□□ 1
Nup98Q6PFD9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nup98Q6PFD9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Nup98Q6PFD9 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nup98Q6PFD9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC21.28■■□□□ 1
Nup98Q6PFD9 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.28■■□□□ 1
Nup98Q6PFD9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.28■■□□□ 1
Nup98Q6PFD9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.28■■□□□ 1
Nup98Q6PFD9 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC21.28■■□□□ 1
Nup98Q6PFD9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nup98Q6PFD9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Nup98Q6PFD9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nup98Q6PFD9 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nup98Q6PFD9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Nup98Q6PFD9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.27■■□□□ 1
Nup98Q6PFD9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC21.27■□□□□ 0.99
Nup98Q6PFD9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Nup98Q6PFD9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup98Q6PFD9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Nup98Q6PFD9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup98Q6PFD9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup98Q6PFD9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Nup98Q6PFD9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Nup98Q6PFD9 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup98Q6PFD9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup98Q6PFD9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup98Q6PFD9 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.25■□□□□ 0.99
Nup98Q6PFD9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup98Q6PFD9 Gm45058-201ENSMUST00000205810 766 ntBASIC21.25■□□□□ 0.99
Nup98Q6PFD9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nup98Q6PFD9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nup98Q6PFD9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nup98Q6PFD9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Nup98Q6PFD9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.24■□□□□ 0.99
Nup98Q6PFD9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nup98Q6PFD9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Nup98Q6PFD9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nup98Q6PFD9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup98Q6PFD9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup98Q6PFD9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup98Q6PFD9 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup98Q6PFD9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup98Q6PFD9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup98Q6PFD9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup98Q6PFD9 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup98Q6PFD9 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup98Q6PFD9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nup98Q6PFD9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nup98Q6PFD9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.22■□□□□ 0.99
Nup98Q6PFD9 Gm7370-201ENSMUST00000219471 767 ntBASIC21.22■□□□□ 0.99
Nup98Q6PFD9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Nup98Q6PFD9 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.22■□□□□ 0.99
Nup98Q6PFD9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nup98Q6PFD9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nup98Q6PFD9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Nup98Q6PFD9 Gm10013-201ENSMUST00000106074 672 ntBASIC21.22■□□□□ 0.99
Nup98Q6PFD9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC21.22■□□□□ 0.99
Nup98Q6PFD9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.22■□□□□ 0.99
Nup98Q6PFD9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup98Q6PFD9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup98Q6PFD9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup98Q6PFD9 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nup98Q6PFD9 Gm37025-201ENSMUST00000195159 829 ntBASIC21.21■□□□□ 0.99
Nup98Q6PFD9 Gm38342-201ENSMUST00000195710 2980 ntBASIC21.21■□□□□ 0.99
Nup98Q6PFD9 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nup98Q6PFD9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup98Q6PFD9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nup98Q6PFD9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup98Q6PFD9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Nup98Q6PFD9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Nup98Q6PFD9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nup98Q6PFD9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms