Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Rnf220Q6PDX6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rnf220Q6PDX6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.97■□□□□ 0.31
Rnf220Q6PDX6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf220Q6PDX6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Rnf220Q6PDX6 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf220Q6PDX6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf220Q6PDX6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rnf220Q6PDX6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Rnf220Q6PDX6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf220Q6PDX6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf220Q6PDX6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms