Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ShbQ6PD21 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
ShbQ6PD21 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ShbQ6PD21 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ShbQ6PD21 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.52■□□□□ 0.72
ShbQ6PD21 Gm26039-201ENSMUST00000158152 144 ntBASIC19.52■□□□□ 0.72
ShbQ6PD21 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ShbQ6PD21 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.52■□□□□ 0.72
ShbQ6PD21 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.52■□□□□ 0.72
ShbQ6PD21 Il3ra-202ENSMUST00000223589 738 ntBASIC19.52■□□□□ 0.72
ShbQ6PD21 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ShbQ6PD21 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ShbQ6PD21 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ShbQ6PD21 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ShbQ6PD21 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ShbQ6PD21 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
ShbQ6PD21 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.51■□□□□ 0.71
ShbQ6PD21 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.51■□□□□ 0.71
ShbQ6PD21 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.51■□□□□ 0.71
ShbQ6PD21 Gm28659-201ENSMUST00000188013 759 ntBASIC19.51■□□□□ 0.71
ShbQ6PD21 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.51■□□□□ 0.71
ShbQ6PD21 Gm10566-201ENSMUST00000086739 996 ntBASIC19.51■□□□□ 0.71
ShbQ6PD21 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ShbQ6PD21 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ShbQ6PD21 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ShbQ6PD21 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ShbQ6PD21 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.5■□□□□ 0.71
ShbQ6PD21 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.5■□□□□ 0.71
ShbQ6PD21 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ShbQ6PD21 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ShbQ6PD21 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ShbQ6PD21 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
ShbQ6PD21 Olfr129-201ENSMUST00000122318 993 ntBASIC19.49■□□□□ 0.71
ShbQ6PD21 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.49■□□□□ 0.71
ShbQ6PD21 Gm6623-201ENSMUST00000173570 544 ntBASIC19.49■□□□□ 0.71
ShbQ6PD21 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ShbQ6PD21 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ShbQ6PD21 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ShbQ6PD21 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ShbQ6PD21 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ShbQ6PD21 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ShbQ6PD21 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ShbQ6PD21 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.48■□□□□ 0.71
ShbQ6PD21 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ShbQ6PD21 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
ShbQ6PD21 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ShbQ6PD21 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ShbQ6PD21 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ShbQ6PD21 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ShbQ6PD21 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ShbQ6PD21 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ShbQ6PD21 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
ShbQ6PD21 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ShbQ6PD21 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ShbQ6PD21 Mir770-201ENSMUST00000103252 94 ntBASIC19.47■□□□□ 0.71
ShbQ6PD21 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ShbQ6PD21 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ShbQ6PD21 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.47■□□□□ 0.71
ShbQ6PD21 Gm5864-201ENSMUST00000202263 970 ntBASIC19.47■□□□□ 0.71
ShbQ6PD21 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ShbQ6PD21 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ShbQ6PD21 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ShbQ6PD21 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ShbQ6PD21 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ShbQ6PD21 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ShbQ6PD21 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ShbQ6PD21 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ShbQ6PD21 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ShbQ6PD21 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.46■□□□□ 0.71
ShbQ6PD21 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.46■□□□□ 0.71
ShbQ6PD21 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ShbQ6PD21 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShbQ6PD21 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShbQ6PD21 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ShbQ6PD21 Gm13401-201ENSMUST00000117074 291 ntBASIC19.45■□□□□ 0.7
ShbQ6PD21 Gm9731-201ENSMUST00000209480 747 ntBASIC19.45■□□□□ 0.7
ShbQ6PD21 Gm45328-201ENSMUST00000210942 917 ntBASIC19.45■□□□□ 0.7
ShbQ6PD21 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.45■□□□□ 0.7
ShbQ6PD21 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShbQ6PD21 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ShbQ6PD21 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.45■□□□□ 0.7
ShbQ6PD21 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShbQ6PD21 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.44■□□□□ 0.7
ShbQ6PD21 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ShbQ6PD21 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ShbQ6PD21 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ShbQ6PD21 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShbQ6PD21 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms