Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.16■□□□□ 0.5
Casc4Q6P2L7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Casc4Q6P2L7 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.15■□□□□ 0.5
Casc4Q6P2L7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Casc4Q6P2L7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Casc4Q6P2L7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.15■□□□□ 0.5
Casc4Q6P2L7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Casc4Q6P2L7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Casc4Q6P2L7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Casc4Q6P2L7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Casc4Q6P2L7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Casc4Q6P2L7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Casc4Q6P2L7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Casc4Q6P2L7 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.14■□□□□ 0.5
Casc4Q6P2L7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Gm2399-201ENSMUST00000104944 225 ntBASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Casc4Q6P2L7 Rarb-207ENSMUST00000225921 2756 ntBASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Gm12896-201ENSMUST00000118430 226 ntBASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Casc4Q6P2L7 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Gm2559-201ENSMUST00000201323 363 ntBASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.12■□□□□ 0.49
Casc4Q6P2L7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Casc4Q6P2L7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Casc4Q6P2L7 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.11■□□□□ 0.49
Casc4Q6P2L7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Casc4Q6P2L7 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.11■□□□□ 0.49
Casc4Q6P2L7 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Casc4Q6P2L7 Gm20049-201ENSMUST00000219950 730 ntBASIC18.11■□□□□ 0.49
Casc4Q6P2L7 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.11■□□□□ 0.49
Casc4Q6P2L7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.11■□□□□ 0.49
Casc4Q6P2L7 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Casc4Q6P2L7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Casc4Q6P2L7 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Casc4Q6P2L7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Casc4Q6P2L7 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Casc4Q6P2L7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Casc4Q6P2L7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Casc4Q6P2L7 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.1■□□□□ 0.49
Casc4Q6P2L7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Casc4Q6P2L7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.1■□□□□ 0.49
Casc4Q6P2L7 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Casc4Q6P2L7 Gm12527-201ENSMUST00000117967 564 ntBASIC18.1■□□□□ 0.49
Casc4Q6P2L7 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms