Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hdac4Q6NZM9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Hdac4Q6NZM9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hdac4Q6NZM9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hdac4Q6NZM9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hdac4Q6NZM9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.08■□□□□ 0.81
Hdac4Q6NZM9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Hdac4Q6NZM9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Hdac4Q6NZM9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Idnk-204ENSMUST00000226010 1898 ntBASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Hdac4Q6NZM9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.06■□□□□ 0.8
Hdac4Q6NZM9 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac4Q6NZM9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac4Q6NZM9 Gm11927-201ENSMUST00000118472 759 ntBASIC20.06■□□□□ 0.8
Hdac4Q6NZM9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.06■□□□□ 0.8
Hdac4Q6NZM9 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.06■□□□□ 0.8
Hdac4Q6NZM9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac4Q6NZM9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Hdac4Q6NZM9 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac4Q6NZM9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac4Q6NZM9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Hdac4Q6NZM9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Hdac4Q6NZM9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Hdac4Q6NZM9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac4Q6NZM9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac4Q6NZM9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.04■□□□□ 0.8
Hdac4Q6NZM9 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.04■□□□□ 0.8
Hdac4Q6NZM9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac4Q6NZM9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Hdac4Q6NZM9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac4Q6NZM9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac4Q6NZM9 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.04■□□□□ 0.8
Hdac4Q6NZM9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac4Q6NZM9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Hdac4Q6NZM9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Gm4968-201ENSMUST00000071458 858 ntBASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Hdac4Q6NZM9 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.02■□□□□ 0.8
Hdac4Q6NZM9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hdac4Q6NZM9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hdac4Q6NZM9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.02■□□□□ 0.8
Hdac4Q6NZM9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.02■□□□□ 0.8
Hdac4Q6NZM9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Hdac4Q6NZM9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hdac4Q6NZM9 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Hdac4Q6NZM9 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.02■□□□□ 0.8
Hdac4Q6NZM9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hdac4Q6NZM9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Hdac4Q6NZM9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Gm2559-201ENSMUST00000201323 363 ntBASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Hdac4Q6NZM9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms