Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sp140Q6NSQ5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Gm15039-201ENSMUST00000118914 875 ntBASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Gm26524-201ENSMUST00000192339 390 ntBASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Sp140Q6NSQ5 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Mir5133-201ENSMUST00000174955 77 ntBASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sp140Q6NSQ5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Sp140Q6NSQ5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Sp140Q6NSQ5 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Sp140Q6NSQ5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.13■□□□□ 0.49
Sp140Q6NSQ5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.13■□□□□ 0.49
Sp140Q6NSQ5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sp140Q6NSQ5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sp140Q6NSQ5 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sp140Q6NSQ5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sp140Q6NSQ5 Gm44549-201ENSMUST00000208351 577 ntBASIC18.13■□□□□ 0.49
Sp140Q6NSQ5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sp140Q6NSQ5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sp140Q6NSQ5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Sp140Q6NSQ5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sp140Q6NSQ5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Idnk-204ENSMUST00000226010 1898 ntBASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.12■□□□□ 0.49
Sp140Q6NSQ5 Gm2399-201ENSMUST00000104944 225 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms