Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhga7Q6DD96 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhga7Q6DD96 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhga7Q6DD96 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Gm5874-201ENSMUST00000096101 508 ntBASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhga7Q6DD96 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhga7Q6DD96 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga7Q6DD96 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga7Q6DD96 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga7Q6DD96 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga7Q6DD96 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhga7Q6DD96 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 AV356131-201ENSMUST00000206201 750 ntBASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhga7Q6DD96 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhga7Q6DD96 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms