Protein–RNA interactions for Protein: Q6A009

Ltn1, E3 ubiquitin-protein ligase listerin, mousemouse

Predictions only

Length 1,767 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ltn1Q6A009 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ltn1Q6A009 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ltn1Q6A009 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ltn1Q6A009 Gm14859-201ENSMUST00000117752 357 ntBASIC21.37■■□□□ 1.01
Ltn1Q6A009 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ltn1Q6A009 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ltn1Q6A009 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ltn1Q6A009 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ltn1Q6A009 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ltn1Q6A009 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Gm7791-201ENSMUST00000219066 539 ntBASIC21.36■■□□□ 1.01
Ltn1Q6A009 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ltn1Q6A009 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Gm10418-201ENSMUST00000100943 576 ntBASIC21.36■■□□□ 1.01
Ltn1Q6A009 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ltn1Q6A009 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ltn1Q6A009 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ltn1Q6A009 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ltn1Q6A009 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC21.35■■□□□ 1.01
Ltn1Q6A009 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ltn1Q6A009 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ltn1Q6A009 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ltn1Q6A009 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.34■■□□□ 1.01
Ltn1Q6A009 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ltn1Q6A009 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ltn1Q6A009 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ltn1Q6A009 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ltn1Q6A009 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ltn1Q6A009 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ltn1Q6A009 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ltn1Q6A009 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Ltn1Q6A009 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Ltn1Q6A009 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC21.33■■□□□ 1.01
Ltn1Q6A009 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ltn1Q6A009 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ltn1Q6A009 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ltn1Q6A009 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
Ltn1Q6A009 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ltn1Q6A009 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ltn1Q6A009 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ltn1Q6A009 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ltn1Q6A009 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ltn1Q6A009 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.32■■□□□ 1
Ltn1Q6A009 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ltn1Q6A009 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ltn1Q6A009 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.32■■□□□ 1
Ltn1Q6A009 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ltn1Q6A009 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ltn1Q6A009 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Ltn1Q6A009 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.32■■□□□ 1
Ltn1Q6A009 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.32■■□□□ 1
Ltn1Q6A009 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ltn1Q6A009 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ltn1Q6A009 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.31■■□□□ 1
Ltn1Q6A009 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ltn1Q6A009 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Ltn1Q6A009 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ltn1Q6A009 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.31■■□□□ 1
Ltn1Q6A009 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ltn1Q6A009 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ltn1Q6A009 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ltn1Q6A009 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.31■■□□□ 1
Ltn1Q6A009 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ltn1Q6A009 Gm5587-201ENSMUST00000206270 674 ntBASIC21.31■■□□□ 1
Ltn1Q6A009 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ltn1Q6A009 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ltn1Q6A009 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC21.31■■□□□ 1
Ltn1Q6A009 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Ltn1Q6A009 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ltn1Q6A009 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ltn1Q6A009 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ltn1Q6A009 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Ltn1Q6A009 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ltn1Q6A009 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC21.3■■□□□ 1
Ltn1Q6A009 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ltn1Q6A009 Mir1668-201ENSMUST00000184114 107 ntBASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms