Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Six3Q62233 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Six3Q62233 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Six3Q62233 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Six3Q62233 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Six3Q62233 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.51■□□□□ 0.39
Six3Q62233 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six3Q62233 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six3Q62233 Gm10849-201ENSMUST00000100397 618 ntBASIC17.51■□□□□ 0.39
Six3Q62233 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six3Q62233 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Six3Q62233 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.51■□□□□ 0.39
Six3Q62233 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six3Q62233 Gm6365-201ENSMUST00000054711 744 ntBASIC17.51■□□□□ 0.39
Six3Q62233 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Six3Q62233 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six3Q62233 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six3Q62233 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six3Q62233 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six3Q62233 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Six3Q62233 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Six3Q62233 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Six3Q62233 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.5■□□□□ 0.39
Six3Q62233 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Six3Q62233 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.5■□□□□ 0.39
Six3Q62233 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.5■□□□□ 0.39
Six3Q62233 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Six3Q62233 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six3Q62233 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six3Q62233 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six3Q62233 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Six3Q62233 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six3Q62233 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.49■□□□□ 0.39
Six3Q62233 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six3Q62233 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.49■□□□□ 0.39
Six3Q62233 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.49■□□□□ 0.39
Six3Q62233 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six3Q62233 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six3Q62233 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Six3Q62233 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six3Q62233 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Six3Q62233 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.49■□□□□ 0.39
Six3Q62233 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Six3Q62233 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Six3Q62233 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.48■□□□□ 0.39
Six3Q62233 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Six3Q62233 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six3Q62233 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six3Q62233 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Six3Q62233 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six3Q62233 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six3Q62233 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Six3Q62233 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six3Q62233 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Six3Q62233 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.48■□□□□ 0.39
Six3Q62233 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six3Q62233 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six3Q62233 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Six3Q62233 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.48■□□□□ 0.39
Six3Q62233 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Six3Q62233 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.48■□□□□ 0.39
Six3Q62233 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Six3Q62233 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six3Q62233 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.47■□□□□ 0.39
Six3Q62233 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six3Q62233 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Six3Q62233 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.47■□□□□ 0.39
Six3Q62233 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six3Q62233 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six3Q62233 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.47■□□□□ 0.39
Six3Q62233 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Six3Q62233 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Six3Q62233 Gm7291-201ENSMUST00000199147 382 ntBASIC17.47■□□□□ 0.39
Six3Q62233 Gm42569-201ENSMUST00000200539 472 ntBASIC17.47■□□□□ 0.39
Six3Q62233 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six3Q62233 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Six3Q62233 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six3Q62233 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six3Q62233 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.47■□□□□ 0.39
Six3Q62233 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Six3Q62233 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Six3Q62233 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms