Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Clcn4Q61418 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Clcn4Q61418 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.53■□□□□ 0.24
Clcn4Q61418 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.53■□□□□ 0.24
Clcn4Q61418 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn4Q61418 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn4Q61418 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn4Q61418 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn4Q61418 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.52■□□□□ 0.24
Clcn4Q61418 Mir5133-201ENSMUST00000174955 77 ntBASIC16.52■□□□□ 0.24
Clcn4Q61418 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.52■□□□□ 0.24
Clcn4Q61418 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn4Q61418 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Clcn4Q61418 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn4Q61418 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn4Q61418 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn4Q61418 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn4Q61418 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn4Q61418 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn4Q61418 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn4Q61418 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.51■□□□□ 0.23
Clcn4Q61418 Gm27011-201ENSMUST00000182352 972 ntBASIC16.51■□□□□ 0.23
Clcn4Q61418 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.51■□□□□ 0.23
Clcn4Q61418 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Clcn4Q61418 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn4Q61418 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn4Q61418 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn4Q61418 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn4Q61418 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Clcn4Q61418 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn4Q61418 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn4Q61418 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn4Q61418 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.5■□□□□ 0.23
Clcn4Q61418 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn4Q61418 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn4Q61418 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Clcn4Q61418 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.5■□□□□ 0.23
Clcn4Q61418 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn4Q61418 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.5■□□□□ 0.23
Clcn4Q61418 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Clcn4Q61418 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn4Q61418 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Clcn4Q61418 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn4Q61418 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn4Q61418 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn4Q61418 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn4Q61418 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Clcn4Q61418 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn4Q61418 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn4Q61418 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Clcn4Q61418 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.49■□□□□ 0.23
Clcn4Q61418 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Clcn4Q61418 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Clcn4Q61418 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn4Q61418 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Clcn4Q61418 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn4Q61418 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn4Q61418 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.49■□□□□ 0.23
Clcn4Q61418 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn4Q61418 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn4Q61418 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn4Q61418 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Clcn4Q61418 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn4Q61418 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn4Q61418 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn4Q61418 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Clcn4Q61418 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Clcn4Q61418 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn4Q61418 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn4Q61418 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.48■□□□□ 0.23
Clcn4Q61418 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn4Q61418 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn4Q61418 Gm12669-201ENSMUST00000122162 1009 ntBASIC16.48■□□□□ 0.23
Clcn4Q61418 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.48■□□□□ 0.23
Clcn4Q61418 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Clcn4Q61418 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Clcn4Q61418 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Clcn4Q61418 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn4Q61418 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn4Q61418 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.47■□□□□ 0.23
Clcn4Q61418 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC16.47■□□□□ 0.23
Clcn4Q61418 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Clcn4Q61418 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn4Q61418 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn4Q61418 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.47■□□□□ 0.23
Clcn4Q61418 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Clcn4Q61418 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.47■□□□□ 0.23
Clcn4Q61418 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn4Q61418 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn4Q61418 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Clcn4Q61418 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms