Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.12■□□□□ 0.49
Six4Q61321 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Six4Q61321 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Six4Q61321 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six4Q61321 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Six4Q61321 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Six4Q61321 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Six4Q61321 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Six4Q61321 Gm13158-201ENSMUST00000122007 736 ntBASIC18.11■□□□□ 0.49
Six4Q61321 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Six4Q61321 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six4Q61321 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Six4Q61321 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Six4Q61321 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Six4Q61321 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six4Q61321 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six4Q61321 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six4Q61321 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six4Q61321 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six4Q61321 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six4Q61321 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Six4Q61321 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.1■□□□□ 0.49
Six4Q61321 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six4Q61321 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six4Q61321 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Six4Q61321 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
Six4Q61321 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Six4Q61321 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six4Q61321 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six4Q61321 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.09■□□□□ 0.49
Six4Q61321 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Six4Q61321 Gm20760-201ENSMUST00000179197 648 ntBASIC18.09■□□□□ 0.49
Six4Q61321 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.09■□□□□ 0.49
Six4Q61321 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.09■□□□□ 0.49
Six4Q61321 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six4Q61321 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Six4Q61321 Rarb-207ENSMUST00000225921 2756 ntBASIC18.09■□□□□ 0.49
Six4Q61321 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Six4Q61321 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Six4Q61321 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
Six4Q61321 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.08■□□□□ 0.49
Six4Q61321 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.08■□□□□ 0.49
Six4Q61321 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six4Q61321 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six4Q61321 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.08■□□□□ 0.49
Six4Q61321 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Six4Q61321 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Six4Q61321 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six4Q61321 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six4Q61321 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Six4Q61321 Gm10138-203ENSMUST00000206952 366 ntBASIC18.08■□□□□ 0.48
Six4Q61321 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.08■□□□□ 0.48
Six4Q61321 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six4Q61321 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six4Q61321 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six4Q61321 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six4Q61321 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.08■□□□□ 0.48
Six4Q61321 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Six4Q61321 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Six4Q61321 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Six4Q61321 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six4Q61321 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Six4Q61321 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Six4Q61321 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Six4Q61321 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six4Q61321 Gm5643-201ENSMUST00000117081 966 ntBASIC18.07■□□□□ 0.48
Six4Q61321 Gm15375-201ENSMUST00000119510 849 ntBASIC18.07■□□□□ 0.48
Six4Q61321 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six4Q61321 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six4Q61321 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six4Q61321 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.07■□□□□ 0.48
Six4Q61321 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six4Q61321 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six4Q61321 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Six4Q61321 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Six4Q61321 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six4Q61321 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six4Q61321 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Six4Q61321 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six4Q61321 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six4Q61321 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.06■□□□□ 0.48
Six4Q61321 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six4Q61321 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Six4Q61321 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.06■□□□□ 0.48
Six4Q61321 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.06■□□□□ 0.48
Six4Q61321 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Six4Q61321 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Six4Q61321 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six4Q61321 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Six4Q61321 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.06■□□□□ 0.48
Six4Q61321 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Six4Q61321 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Six4Q61321 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six4Q61321 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.05■□□□□ 0.48
Six4Q61321 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.05■□□□□ 0.48
Six4Q61321 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.05■□□□□ 0.48
Six4Q61321 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Six4Q61321 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six4Q61321 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six4Q61321 Idnk-204ENSMUST00000226010 1898 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms