Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hcfc1Q61191 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Hcfc1Q61191 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.12■□□□□ 0.01
Hcfc1Q61191 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Gm37025-201ENSMUST00000195159 829 ntBASIC15.11■□□□□ 0.01
Hcfc1Q61191 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcfc1Q61191 Gm17807-201ENSMUST00000186869 298 ntBASIC15.1■□□□□ 0.01
Hcfc1Q61191 Gm7791-201ENSMUST00000219066 539 ntBASIC15.1■□□□□ 0.01
Hcfc1Q61191 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Gm13401-201ENSMUST00000117074 291 ntBASIC15.1■□□□□ 0.01
Hcfc1Q61191 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcfc1Q61191 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Gm13474-201ENSMUST00000122466 815 ntBASIC15.09■□□□□ 0.01
Hcfc1Q61191 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.09■□□□□ 0.01
Hcfc1Q61191 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.09■□□□□ 0.01
Hcfc1Q61191 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Hcfc1Q61191 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.09■□□□□ 0.01
Hcfc1Q61191 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Hcfc1Q61191 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hcfc1Q61191 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.08■□□□□ 0
Hcfc1Q61191 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.08■□□□□ 0
Hcfc1Q61191 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hcfc1Q61191 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hcfc1Q61191 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Hcfc1Q61191 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hcfc1Q61191 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.08■□□□□ 0
Hcfc1Q61191 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hcfc1Q61191 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hcfc1Q61191 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Hcfc1Q61191 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.07■□□□□ 0
Hcfc1Q61191 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcfc1Q61191 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.07■□□□□ 0
Hcfc1Q61191 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.07■□□□□ 0
Hcfc1Q61191 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.07■□□□□ 0
Hcfc1Q61191 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcfc1Q61191 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hcfc1Q61191 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcfc1Q61191 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcfc1Q61191 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hcfc1Q61191 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Hcfc1Q61191 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hcfc1Q61191 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcfc1Q61191 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcfc1Q61191 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC15.07■□□□□ 0
Hcfc1Q61191 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcfc1Q61191 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.06■□□□□ 0
Hcfc1Q61191 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcfc1Q61191 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hcfc1Q61191 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcfc1Q61191 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcfc1Q61191 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcfc1Q61191 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcfc1Q61191 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.06■□□□□ 0
Hcfc1Q61191 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcfc1Q61191 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.06■□□□□ 0
Hcfc1Q61191 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcfc1Q61191 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.06■□□□□ 0
Hcfc1Q61191 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcfc1Q61191 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcfc1Q61191 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcfc1Q61191 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcfc1Q61191 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms