Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Clns1aQ61189 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.36■□□□□ 0.05
Clns1aQ61189 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.36■□□□□ 0.05
Clns1aQ61189 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Clns1aQ61189 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Clns1aQ61189 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.36■□□□□ 0.05
Clns1aQ61189 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Clns1aQ61189 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clns1aQ61189 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Clns1aQ61189 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.35■□□□□ 0.05
Clns1aQ61189 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.35■□□□□ 0.05
Clns1aQ61189 Spcs1-204ENSMUST00000226782 949 ntBASIC15.35■□□□□ 0.05
Clns1aQ61189 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Clns1aQ61189 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clns1aQ61189 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clns1aQ61189 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clns1aQ61189 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clns1aQ61189 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.34■□□□□ 0.05
Clns1aQ61189 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
Clns1aQ61189 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clns1aQ61189 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Clns1aQ61189 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.34■□□□□ 0.05
Clns1aQ61189 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clns1aQ61189 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Clns1aQ61189 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.34■□□□□ 0.05
Clns1aQ61189 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clns1aQ61189 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clns1aQ61189 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Clns1aQ61189 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Clns1aQ61189 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.34■□□□□ 0.05
Clns1aQ61189 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clns1aQ61189 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clns1aQ61189 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Clns1aQ61189 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clns1aQ61189 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clns1aQ61189 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clns1aQ61189 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clns1aQ61189 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clns1aQ61189 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Clns1aQ61189 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.33■□□□□ 0.04
Clns1aQ61189 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.33■□□□□ 0.04
Clns1aQ61189 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.33■□□□□ 0.04
Clns1aQ61189 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.33■□□□□ 0.04
Clns1aQ61189 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.33■□□□□ 0.04
Clns1aQ61189 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.33■□□□□ 0.04
Clns1aQ61189 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.33■□□□□ 0.04
Clns1aQ61189 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Clns1aQ61189 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Clns1aQ61189 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clns1aQ61189 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Clns1aQ61189 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clns1aQ61189 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clns1aQ61189 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Clns1aQ61189 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clns1aQ61189 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Clns1aQ61189 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.32■□□□□ 0.04
Clns1aQ61189 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.32■□□□□ 0.04
Clns1aQ61189 Rps24-207ENSMUST00000224568 714 ntBASIC15.32■□□□□ 0.04
Clns1aQ61189 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Clns1aQ61189 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.32■□□□□ 0.04
Clns1aQ61189 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clns1aQ61189 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC15.32■□□□□ 0.04
Clns1aQ61189 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clns1aQ61189 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Clns1aQ61189 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms