Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sdf4Q61112 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdf4Q61112 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Sdf4Q61112 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdf4Q61112 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdf4Q61112 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sdf4Q61112 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdf4Q61112 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdf4Q61112 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdf4Q61112 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdf4Q61112 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.22■□□□□ 0.51
Sdf4Q61112 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.22■□□□□ 0.51
Sdf4Q61112 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdf4Q61112 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdf4Q61112 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sdf4Q61112 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.22■□□□□ 0.51
Sdf4Q61112 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Sdf4Q61112 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sdf4Q61112 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdf4Q61112 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Sdf4Q61112 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdf4Q61112 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sdf4Q61112 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.21■□□□□ 0.51
Sdf4Q61112 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.21■□□□□ 0.51
Sdf4Q61112 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.21■□□□□ 0.51
Sdf4Q61112 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sdf4Q61112 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.2■□□□□ 0.5
Sdf4Q61112 Gm2559-201ENSMUST00000201323 363 ntBASIC18.2■□□□□ 0.5
Sdf4Q61112 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Sdf4Q61112 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sdf4Q61112 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sdf4Q61112 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdf4Q61112 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdf4Q61112 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sdf4Q61112 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sdf4Q61112 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sdf4Q61112 Gm38285-201ENSMUST00000192928 922 ntBASIC18.19■□□□□ 0.5
Sdf4Q61112 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdf4Q61112 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdf4Q61112 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdf4Q61112 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdf4Q61112 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdf4Q61112 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sdf4Q61112 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Sdf4Q61112 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.19■□□□□ 0.5
Sdf4Q61112 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdf4Q61112 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sdf4Q61112 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdf4Q61112 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.18■□□□□ 0.5
Sdf4Q61112 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdf4Q61112 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdf4Q61112 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdf4Q61112 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdf4Q61112 Gm12441-201ENSMUST00000121806 588 ntBASIC18.18■□□□□ 0.5
Sdf4Q61112 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.18■□□□□ 0.5
Sdf4Q61112 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sdf4Q61112 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdf4Q61112 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdf4Q61112 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sdf4Q61112 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdf4Q61112 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sdf4Q61112 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sdf4Q61112 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sdf4Q61112 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.17■□□□□ 0.5
Sdf4Q61112 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdf4Q61112 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdf4Q61112 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sdf4Q61112 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdf4Q61112 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sdf4Q61112 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.17■□□□□ 0.5
Sdf4Q61112 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.17■□□□□ 0.5
Sdf4Q61112 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.17■□□□□ 0.5
Sdf4Q61112 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Sdf4Q61112 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.17■□□□□ 0.5
Sdf4Q61112 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.17■□□□□ 0.5
Sdf4Q61112 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdf4Q61112 Zfp783-201ENSMUST00000095946 670 ntBASIC18.17■□□□□ 0.5
Sdf4Q61112 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Sdf4Q61112 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sdf4Q61112 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Sdf4Q61112 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Sdf4Q61112 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sdf4Q61112 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Sdf4Q61112 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Sdf4Q61112 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdf4Q61112 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sdf4Q61112 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.16■□□□□ 0.5
Sdf4Q61112 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms