Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Shroom1Q5SX79 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Shroom1Q5SX79 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Shroom1Q5SX79 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Gm18025-201ENSMUST00000221733 862 ntBASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Shroom1Q5SX79 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Gm43183-201ENSMUST00000200632 547 ntBASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Shroom1Q5SX79 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Mir6349-201ENSMUST00000184059 97 ntBASIC19.02■□□□□ 0.64
Shroom1Q5SX79 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Gm21814-202ENSMUST00000203277 873 ntBASIC19.02■□□□□ 0.64
Shroom1Q5SX79 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Shroom1Q5SX79 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Shroom1Q5SX79 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Shroom1Q5SX79 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.02■□□□□ 0.63
Shroom1Q5SX79 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms