Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav8d-1Q5R1H8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Gm27801-201ENSMUST00000184174 223 ntBASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav8d-1Q5R1H8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav8d-1Q5R1H8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav8d-1Q5R1H8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav8d-1Q5R1H8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav8d-1Q5R1H8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav8d-1Q5R1H8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms