Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav5d-4Q5R1F6 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav5d-4Q5R1F6 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Gm6211-202ENSMUST00000167849 925 ntBASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav5d-4Q5R1F6 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Gm7290-201ENSMUST00000104990 617 ntBASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Gm12918-201ENSMUST00000120234 636 ntBASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Gm15710-201ENSMUST00000121821 636 ntBASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Gm5075-201ENSMUST00000196916 622 ntBASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Trav5d-4Q5R1F6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav5d-4Q5R1F6 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav5d-4Q5R1F6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.38■□□□□ 0.05
Trav5d-4Q5R1F6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms