Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Gm8309-201ENSMUST00000206627 1448 ntBASIC13.98□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Gm10167-201ENSMUST00000150411 1479 ntBASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav15-1-dv6-1Q5R1D2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.96□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav15-1-dv6-1Q5R1D2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms