Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trav8d-2Q5R1B6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Gm17807-201ENSMUST00000186869 298 ntBASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav8d-2Q5R1B6 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.52■□□□□ 0.39
Trav8d-2Q5R1B6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trav8d-2Q5R1B6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Gm7638-201ENSMUST00000121348 967 ntBASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Gm7791-201ENSMUST00000219066 539 ntBASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav8d-2Q5R1B6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Mir1668-201ENSMUST00000184114 107 ntBASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Gm7461-201ENSMUST00000058918 827 ntBASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav8d-2Q5R1B6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav8d-2Q5R1B6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Gm28033-201ENSMUST00000184224 96 ntBASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Gm29518-201ENSMUST00000190858 372 ntBASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav8d-2Q5R1B6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav8d-2Q5R1B6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms