Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
Trim41Q5NCC3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Trim41Q5NCC3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC31.19■■■□□ 2.58
Trim41Q5NCC3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Trim41Q5NCC3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Trim41Q5NCC3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Trim41Q5NCC3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Trim41Q5NCC3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Trim41Q5NCC3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
Trim41Q5NCC3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
Trim41Q5NCC3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Trim41Q5NCC3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Trim41Q5NCC3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Trim41Q5NCC3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
Trim41Q5NCC3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC31.17■■■□□ 2.58
Trim41Q5NCC3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Trim41Q5NCC3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Trim41Q5NCC3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Trim41Q5NCC3 Gm7063-201ENSMUST00000186840 981 ntBASIC31.17■■■□□ 2.58
Trim41Q5NCC3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Trim41Q5NCC3 Umpk-ps-201ENSMUST00000211897 827 ntBASIC31.17■■■□□ 2.58
Trim41Q5NCC3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Trim41Q5NCC3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Trim41Q5NCC3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Trim41Q5NCC3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Trim41Q5NCC3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC31.17■■■□□ 2.58
Trim41Q5NCC3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trim41Q5NCC3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Gm10616-201ENSMUST00000205285 2127 ntBASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Gm9885-202ENSMUST00000186234 2209 ntBASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Trim41Q5NCC3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Trim41Q5NCC3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
Trim41Q5NCC3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Trim41Q5NCC3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC31.15■■■□□ 2.58
Trim41Q5NCC3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Trim41Q5NCC3 Gm18032-201ENSMUST00000222541 538 ntBASIC31.15■■■□□ 2.58
Trim41Q5NCC3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Trim41Q5NCC3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Trim41Q5NCC3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Trim41Q5NCC3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Trim41Q5NCC3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC31.14■■■□□ 2.58
Trim41Q5NCC3 AC159205.6-201ENSMUST00000224935 887 ntBASIC31.14■■■□□ 2.58
Trim41Q5NCC3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Trim41Q5NCC3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Trim41Q5NCC3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
Trim41Q5NCC3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Trim41Q5NCC3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Trim41Q5NCC3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Trim41Q5NCC3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Trim41Q5NCC3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
Trim41Q5NCC3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Trim41Q5NCC3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Trim41Q5NCC3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Trim41Q5NCC3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Trim41Q5NCC3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Trim41Q5NCC3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
Trim41Q5NCC3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Trim41Q5NCC3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Trim41Q5NCC3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Trim41Q5NCC3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Trim41Q5NCC3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Trim41Q5NCC3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Trim41Q5NCC3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Trim41Q5NCC3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
Trim41Q5NCC3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
Trim41Q5NCC3 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Trim41Q5NCC3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Trim41Q5NCC3 Gm6190-201ENSMUST00000220683 1374 ntBASIC31.1■■■□□ 2.57
Trim41Q5NCC3 AW822252-206ENSMUST00000208904 237 ntBASIC31.1■■■□□ 2.57
Trim41Q5NCC3 Gm18959-201ENSMUST00000208954 655 ntBASIC31.1■■■□□ 2.57
Trim41Q5NCC3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC31.1■■■□□ 2.57
Trim41Q5NCC3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Trim41Q5NCC3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Trim41Q5NCC3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Trim41Q5NCC3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
Trim41Q5NCC3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC31.09■■■□□ 2.57
Trim41Q5NCC3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC31.09■■■□□ 2.57
Trim41Q5NCC3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Trim41Q5NCC3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Trim41Q5NCC3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Trim41Q5NCC3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC31.08■■■□□ 2.57
Trim41Q5NCC3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC31.08■■■□□ 2.57
Trim41Q5NCC3 Gm17661-201ENSMUST00000170317 270 ntBASIC31.08■■■□□ 2.57
Trim41Q5NCC3 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC31.08■■■□□ 2.57
Trim41Q5NCC3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC31.08■■■□□ 2.57
Trim41Q5NCC3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Trim41Q5NCC3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Trim41Q5NCC3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Trim41Q5NCC3 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Trim41Q5NCC3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms