Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf20Q5DTM8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf20Q5DTM8 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.37■■□□□ 1.01
Rnf20Q5DTM8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf20Q5DTM8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf20Q5DTM8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf20Q5DTM8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf20Q5DTM8 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf20Q5DTM8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf20Q5DTM8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf20Q5DTM8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf20Q5DTM8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf20Q5DTM8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
Rnf20Q5DTM8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Rnf20Q5DTM8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf20Q5DTM8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf20Q5DTM8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf20Q5DTM8 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.35■■□□□ 1.01
Rnf20Q5DTM8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf20Q5DTM8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf20Q5DTM8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Rnf20Q5DTM8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf20Q5DTM8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rnf20Q5DTM8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Rnf20Q5DTM8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf20Q5DTM8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Gm5408-201ENSMUST00000197998 747 ntBASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf20Q5DTM8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf20Q5DTM8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf20Q5DTM8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf20Q5DTM8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf20Q5DTM8 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
Rnf20Q5DTM8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf20Q5DTM8 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.33■■□□□ 1.01
Rnf20Q5DTM8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf20Q5DTM8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf20Q5DTM8 Gm10602-201ENSMUST00000098239 609 ntBASIC21.33■■□□□ 1.01
Rnf20Q5DTM8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Rnf20Q5DTM8 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rnf20Q5DTM8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Rnf20Q5DTM8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Rnf20Q5DTM8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.32■■□□□ 1
Rnf20Q5DTM8 Flg-201ENSMUST00000050758 1488 ntBASIC21.32■■□□□ 1
Rnf20Q5DTM8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Rnf20Q5DTM8 Gm38285-201ENSMUST00000192928 922 ntBASIC21.32■■□□□ 1
Rnf20Q5DTM8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rnf20Q5DTM8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.32■■□□□ 1
Rnf20Q5DTM8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf20Q5DTM8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf20Q5DTM8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf20Q5DTM8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms