Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx49Q4FZF3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx49Q4FZF3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx49Q4FZF3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ddx49Q4FZF3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Ddx49Q4FZF3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx49Q4FZF3 Gm9103-201ENSMUST00000119371 405 ntBASIC20.8■□□□□ 0.92
Ddx49Q4FZF3 Ank2-226ENSMUST00000189368 339 ntBASIC20.8■□□□□ 0.92
Ddx49Q4FZF3 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.8■□□□□ 0.92
Ddx49Q4FZF3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.8■□□□□ 0.92
Ddx49Q4FZF3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ddx49Q4FZF3 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.8■□□□□ 0.92
Ddx49Q4FZF3 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Ddx49Q4FZF3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.8■□□□□ 0.92
Ddx49Q4FZF3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx49Q4FZF3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx49Q4FZF3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.79■□□□□ 0.92
Ddx49Q4FZF3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx49Q4FZF3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx49Q4FZF3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Ddx49Q4FZF3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx49Q4FZF3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx49Q4FZF3 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.79■□□□□ 0.92
Ddx49Q4FZF3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx49Q4FZF3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 Gm14859-201ENSMUST00000117752 357 ntBASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx49Q4FZF3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
Ddx49Q4FZF3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ddx49Q4FZF3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ddx49Q4FZF3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ddx49Q4FZF3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ddx49Q4FZF3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Mir2861-201ENSMUST00000175539 82 ntBASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Gm2274-201ENSMUST00000184539 609 ntBASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx49Q4FZF3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms