Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ckap2Q3V1H1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Gm10653-202ENSMUST00000139570 835 ntBASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ckap2Q3V1H1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ckap2Q3V1H1 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ckap2Q3V1H1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ckap2Q3V1H1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.6■□□□□ 0.89
Ckap2Q3V1H1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.6■□□□□ 0.89
Ckap2Q3V1H1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ckap2Q3V1H1 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ckap2Q3V1H1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ckap2Q3V1H1 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.6■□□□□ 0.89
Ckap2Q3V1H1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.6■□□□□ 0.89
Ckap2Q3V1H1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ckap2Q3V1H1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ckap2Q3V1H1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 Gm18666-201ENSMUST00000190039 958 ntBASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ckap2Q3V1H1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ckap2Q3V1H1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ckap2Q3V1H1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ckap2Q3V1H1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ckap2Q3V1H1 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ckap2Q3V1H1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Gm10418-201ENSMUST00000100943 576 ntBASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ckap2Q3V1H1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ckap2Q3V1H1 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ckap2Q3V1H1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ckap2Q3V1H1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ckap2Q3V1H1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ckap2Q3V1H1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ckap2Q3V1H1 Gm5643-201ENSMUST00000117081 966 ntBASIC20.56■□□□□ 0.88
Ckap2Q3V1H1 Gm20760-201ENSMUST00000179197 648 ntBASIC20.56■□□□□ 0.88
Ckap2Q3V1H1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ckap2Q3V1H1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Gm11643-201ENSMUST00000119578 864 ntBASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Gm29791-202ENSMUST00000207888 369 ntBASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ckap2Q3V1H1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms