Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnga4Q3UW12 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Cnga4Q3UW12 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cnga4Q3UW12 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cnga4Q3UW12 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnga4Q3UW12 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.25■□□□□ 0.51
Cnga4Q3UW12 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cnga4Q3UW12 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cnga4Q3UW12 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnga4Q3UW12 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnga4Q3UW12 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cnga4Q3UW12 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cnga4Q3UW12 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Gm38205-201ENSMUST00000192243 258 ntBASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cnga4Q3UW12 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cnga4Q3UW12 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.22■□□□□ 0.51
Cnga4Q3UW12 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.22■□□□□ 0.51
Cnga4Q3UW12 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnga4Q3UW12 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnga4Q3UW12 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnga4Q3UW12 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cnga4Q3UW12 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.22■□□□□ 0.51
Cnga4Q3UW12 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.22■□□□□ 0.51
Cnga4Q3UW12 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cnga4Q3UW12 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnga4Q3UW12 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cnga4Q3UW12 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cnga4Q3UW12 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cnga4Q3UW12 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cnga4Q3UW12 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Cnga4Q3UW12 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnga4Q3UW12 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cnga4Q3UW12 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnga4Q3UW12 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnga4Q3UW12 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Cnga4Q3UW12 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.2■□□□□ 0.5
Cnga4Q3UW12 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnga4Q3UW12 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnga4Q3UW12 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cnga4Q3UW12 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cnga4Q3UW12 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnga4Q3UW12 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.19■□□□□ 0.5
Cnga4Q3UW12 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.19■□□□□ 0.5
Cnga4Q3UW12 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.19■□□□□ 0.5
Cnga4Q3UW12 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Cnga4Q3UW12 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.19■□□□□ 0.5
Cnga4Q3UW12 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnga4Q3UW12 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cnga4Q3UW12 Gm9847-201ENSMUST00000052528 599 ntBASIC18.19■□□□□ 0.5
Cnga4Q3UW12 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnga4Q3UW12 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cnga4Q3UW12 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms