Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Mir5122-201ENSMUST00000175004 89 ntBASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Mir2861-201ENSMUST00000175539 82 ntBASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Naf1Q3UMQ8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Naf1Q3UMQ8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Naf1Q3UMQ8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Naf1Q3UMQ8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Naf1Q3UMQ8 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Gm15565-201ENSMUST00000118890 427 ntBASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Mir6349-201ENSMUST00000184059 97 ntBASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Naf1Q3UMQ8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Naf1Q3UMQ8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Naf1Q3UMQ8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Naf1Q3UMQ8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Naf1Q3UMQ8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms