Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Spg11Q3UHA3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Gm14057-201ENSMUST00000120631 482 ntBASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Gm1401-201ENSMUST00000122048 772 ntBASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Spg11Q3UHA3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Spg11Q3UHA3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.61■□□□□ 0.25
Spg11Q3UHA3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Gm12895-201ENSMUST00000122214 226 ntBASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Spg11Q3UHA3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Gm8097-201ENSMUST00000117903 829 ntBASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Spg11Q3UHA3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Spg11Q3UHA3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Spg11Q3UHA3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Spg11Q3UHA3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.58■□□□□ 0.25
Spg11Q3UHA3 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Spg11Q3UHA3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.58■□□□□ 0.25
Spg11Q3UHA3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.58■□□□□ 0.25
Spg11Q3UHA3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Spg11Q3UHA3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Spg11Q3UHA3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Spg11Q3UHA3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Spg11Q3UHA3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Spg11Q3UHA3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Spg11Q3UHA3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Spg11Q3UHA3 Mir770-201ENSMUST00000103252 94 ntBASIC16.58■□□□□ 0.24
Spg11Q3UHA3 Gm10052-201ENSMUST00000168019 960 ntBASIC16.58■□□□□ 0.24
Spg11Q3UHA3 Gm7729-201ENSMUST00000050143 801 ntBASIC16.58■□□□□ 0.24
Spg11Q3UHA3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Spg11Q3UHA3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Spg11Q3UHA3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Gm26039-201ENSMUST00000158152 144 ntBASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Mir5126-201ENSMUST00000175513 77 ntBASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Gm37722-201ENSMUST00000193757 208 ntBASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Spg11Q3UHA3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Spg11Q3UHA3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.56■□□□□ 0.24
Spg11Q3UHA3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Spg11Q3UHA3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Spg11Q3UHA3 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Spg11Q3UHA3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Spg11Q3UHA3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Spg11Q3UHA3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Spg11Q3UHA3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.56■□□□□ 0.24
Spg11Q3UHA3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Spg11Q3UHA3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Spg11Q3UHA3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Spg11Q3UHA3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms