Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col5a2Q3U962 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col5a2Q3U962 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col5a2Q3U962 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col5a2Q3U962 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Col5a2Q3U962 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col5a2Q3U962 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col5a2Q3U962 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Col5a2Q3U962 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Col5a2Q3U962 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.38■■□□□ 1.01
Col5a2Q3U962 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.38■■□□□ 1.01
Col5a2Q3U962 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.38■■□□□ 1.01
Col5a2Q3U962 Gm24841-201ENSMUST00000158676 357 ntBASIC21.38■■□□□ 1.01
Col5a2Q3U962 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Col5a2Q3U962 Gm18115-201ENSMUST00000221209 621 ntBASIC21.38■■□□□ 1.01
Col5a2Q3U962 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col5a2Q3U962 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Col5a2Q3U962 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col5a2Q3U962 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.37■■□□□ 1.01
Col5a2Q3U962 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col5a2Q3U962 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col5a2Q3U962 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col5a2Q3U962 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col5a2Q3U962 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.37■■□□□ 1.01
Col5a2Q3U962 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col5a2Q3U962 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col5a2Q3U962 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC21.37■■□□□ 1.01
Col5a2Q3U962 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.37■■□□□ 1.01
Col5a2Q3U962 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col5a2Q3U962 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col5a2Q3U962 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Col5a2Q3U962 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC21.36■■□□□ 1.01
Col5a2Q3U962 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col5a2Q3U962 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Col5a2Q3U962 Gm11950-201ENSMUST00000121615 838 ntBASIC21.36■■□□□ 1.01
Col5a2Q3U962 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Col5a2Q3U962 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col5a2Q3U962 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col5a2Q3U962 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col5a2Q3U962 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col5a2Q3U962 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col5a2Q3U962 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col5a2Q3U962 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Col5a2Q3U962 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col5a2Q3U962 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col5a2Q3U962 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.35■■□□□ 1.01
Col5a2Q3U962 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.35■■□□□ 1.01
Col5a2Q3U962 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.35■■□□□ 1.01
Col5a2Q3U962 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col5a2Q3U962 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Col5a2Q3U962 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Col5a2Q3U962 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Col5a2Q3U962 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col5a2Q3U962 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Col5a2Q3U962 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col5a2Q3U962 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col5a2Q3U962 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col5a2Q3U962 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col5a2Q3U962 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col5a2Q3U962 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col5a2Q3U962 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Col5a2Q3U962 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.34■■□□□ 1.01
Col5a2Q3U962 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Col5a2Q3U962 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col5a2Q3U962 Gm34391-201ENSMUST00000203706 907 ntBASIC21.33■■□□□ 1.01
Col5a2Q3U962 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.33■■□□□ 1.01
Col5a2Q3U962 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col5a2Q3U962 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col5a2Q3U962 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Col5a2Q3U962 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Col5a2Q3U962 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.33■■□□□ 1.01
Col5a2Q3U962 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col5a2Q3U962 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col5a2Q3U962 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col5a2Q3U962 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
Col5a2Q3U962 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.33■■□□□ 1
Col5a2Q3U962 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Col5a2Q3U962 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Col5a2Q3U962 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col5a2Q3U962 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col5a2Q3U962 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Col5a2Q3U962 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
Col5a2Q3U962 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Col5a2Q3U962 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col5a2Q3U962 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Col5a2Q3U962 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col5a2Q3U962 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col5a2Q3U962 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC21.32■■□□□ 1
Col5a2Q3U962 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col5a2Q3U962 Gm25925-201ENSMUST00000158314 306 ntBASIC21.32■■□□□ 1
Col5a2Q3U962 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.32■■□□□ 1
Col5a2Q3U962 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC21.32■■□□□ 1
Col5a2Q3U962 Il3ra-202ENSMUST00000223589 738 ntBASIC21.32■■□□□ 1
Col5a2Q3U962 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21.32■■□□□ 1
Col5a2Q3U962 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.32■■□□□ 1
Col5a2Q3U962 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col5a2Q3U962 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Col5a2Q3U962 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.31■■□□□ 1
Col5a2Q3U962 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Col5a2Q3U962 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms