Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Fndc4Q3TR08 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Fndc4Q3TR08 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Fndc4Q3TR08 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fndc4Q3TR08 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fndc4Q3TR08 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.27■□□□□ 0.04
Fndc4Q3TR08 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fndc4Q3TR08 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fndc4Q3TR08 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fndc4Q3TR08 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Fndc4Q3TR08 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.27■□□□□ 0.04
Fndc4Q3TR08 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Fndc4Q3TR08 Gm18284-201ENSMUST00000172604 624 ntBASIC15.27■□□□□ 0.04
Fndc4Q3TR08 Gm5874-201ENSMUST00000096101 508 ntBASIC15.27■□□□□ 0.04
Fndc4Q3TR08 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Fndc4Q3TR08 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fndc4Q3TR08 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fndc4Q3TR08 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fndc4Q3TR08 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Fndc4Q3TR08 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Reep4-203ENSMUST00000226563 1444 ntBASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Fndc4Q3TR08 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Gm13234-201ENSMUST00000120010 747 ntBASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Fndc4Q3TR08 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms