Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ctdnep1Q3TP92 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ctdnep1Q3TP92 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Ctdnep1Q3TP92 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Ctdnep1Q3TP92 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ctdnep1Q3TP92 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.75■□□□□ 0.91
Ctdnep1Q3TP92 Gm5408-201ENSMUST00000197998 747 ntBASIC20.75■□□□□ 0.91
Ctdnep1Q3TP92 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctdnep1Q3TP92 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctdnep1Q3TP92 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ctdnep1Q3TP92 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctdnep1Q3TP92 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ctdnep1Q3TP92 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Gm11927-201ENSMUST00000118472 759 ntBASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Mtag2-201ENSMUST00000058665 714 ntBASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ctdnep1Q3TP92 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ctdnep1Q3TP92 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Gm4968-201ENSMUST00000071458 858 ntBASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Gm10602-201ENSMUST00000098239 609 ntBASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctdnep1Q3TP92 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctdnep1Q3TP92 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctdnep1Q3TP92 Flg-201ENSMUST00000050758 1488 ntBASIC20.71■□□□□ 0.91
Ctdnep1Q3TP92 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctdnep1Q3TP92 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctdnep1Q3TP92 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctdnep1Q3TP92 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctdnep1Q3TP92 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctdnep1Q3TP92 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctdnep1Q3TP92 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctdnep1Q3TP92 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctdnep1Q3TP92 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms