Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Khdc4Q3TCX3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Khdc4Q3TCX3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Gm22325-201ENSMUST00000158904 308 ntBASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Khdc4Q3TCX3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Khdc4Q3TCX3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc4Q3TCX3 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc4Q3TCX3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc4Q3TCX3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc4Q3TCX3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc4Q3TCX3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Khdc4Q3TCX3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Khdc4Q3TCX3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Khdc4Q3TCX3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Gm10698-201ENSMUST00000182663 604 ntBASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Khdc4Q3TCX3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Khdc4Q3TCX3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms