Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Gm15635-204ENSMUST00000208024 2539 ntBASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cul4aQ3TCH7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cul4aQ3TCH7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cul4aQ3TCH7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Cul4aQ3TCH7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cul4aQ3TCH7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cul4aQ3TCH7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cul4aQ3TCH7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Cul4aQ3TCH7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cul4aQ3TCH7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cul4aQ3TCH7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cul4aQ3TCH7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cul4aQ3TCH7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms