Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Q3KNL4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Q3KNL4 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.66■□□□□ 0.42
Q3KNL4 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.66■□□□□ 0.42
Q3KNL4 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.66■□□□□ 0.42
Q3KNL4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q3KNL4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q3KNL4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Q3KNL4 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
Q3KNL4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Q3KNL4 Gm10493-201ENSMUST00000097270 612 ntBASIC17.65■□□□□ 0.42
Q3KNL4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q3KNL4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q3KNL4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q3KNL4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Q3KNL4 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.65■□□□□ 0.42
Q3KNL4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Q3KNL4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Q3KNL4 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Q3KNL4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q3KNL4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Q3KNL4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q3KNL4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.64■□□□□ 0.41
Q3KNL4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Q3KNL4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Q3KNL4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q3KNL4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Q3KNL4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Q3KNL4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Q3KNL4 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Q3KNL4 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.63■□□□□ 0.41
Q3KNL4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Q3KNL4 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Q3KNL4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.63■□□□□ 0.41
Q3KNL4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.63■□□□□ 0.41
Q3KNL4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Q3KNL4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Q3KNL4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3KNL4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3KNL4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Q3KNL4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.62■□□□□ 0.41
Q3KNL4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Q3KNL4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3KNL4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3KNL4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3KNL4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3KNL4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3KNL4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Q3KNL4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3KNL4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Q3KNL4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.62■□□□□ 0.41
Q3KNL4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q3KNL4 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.61■□□□□ 0.41
Q3KNL4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q3KNL4 Nespas-201ENSMUST00000143738 1083 ntBASIC17.61■□□□□ 0.41
Q3KNL4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q3KNL4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q3KNL4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.61■□□□□ 0.41
Q3KNL4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Q3KNL4 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.61■□□□□ 0.41
Q3KNL4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q3KNL4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Q3KNL4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Q3KNL4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.6■□□□□ 0.41
Q3KNL4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Q3KNL4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Q3KNL4 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q3KNL4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Q3KNL4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Q3KNL4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Q3KNL4 Gm6420-201ENSMUST00000193885 723 ntBASIC17.6■□□□□ 0.41
Q3KNL4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.6■□□□□ 0.41
Q3KNL4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms