Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Gm37722-201ENSMUST00000193757 208 ntBASIC9.68□□□□□ -0.86
Ush2AQ2QI47 AC155729.1-201ENSMUST00000227758 544 ntBASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ush2AQ2QI47 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Gm6296-201ENSMUST00000222599 943 ntBASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Gm7935-201ENSMUST00000100555 1278 ntBASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Gm1818-201ENSMUST00000169406 1184 ntBASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Ush2AQ2QI47 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Gm14701-201ENSMUST00000117156 348 ntBASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC9.66□□□□□ -0.86
Ush2AQ2QI47 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Ush2AQ2QI47 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Gm11355-201ENSMUST00000121120 306 ntBASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Gm27397-201ENSMUST00000184997 107 ntBASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Gm32996-201ENSMUST00000199828 1447 ntBASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Ush2AQ2QI47 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ush2AQ2QI47 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ush2AQ2QI47 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ush2AQ2QI47 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC9.65□□□□□ -0.87
Ush2AQ2QI47 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Ush2AQ2QI47 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
Ush2AQ2QI47 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Ush2AQ2QI47 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Ush2AQ2QI47 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC9.64□□□□□ -0.87
Ush2AQ2QI47 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Ush2AQ2QI47 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
Ush2AQ2QI47 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Ush2AQ2QI47 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC9.64□□□□□ -0.87
Ush2AQ2QI47 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Ush2AQ2QI47 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms