Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cdx4Q07424 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cdx4Q07424 Gm45141-201ENSMUST00000206502 1888 ntBASIC13.87□□□□□ -0.19
Cdx4Q07424 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Cdx4Q07424 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cdx4Q07424 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.86□□□□□ -0.19
Cdx4Q07424 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cdx4Q07424 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cdx4Q07424 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cdx4Q07424 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC13.85□□□□□ -0.19
Cdx4Q07424 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.85□□□□□ -0.19
Cdx4Q07424 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Cdx4Q07424 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdx4Q07424 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.85□□□□□ -0.19
Cdx4Q07424 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.85□□□□□ -0.19
Cdx4Q07424 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Cdx4Q07424 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cdx4Q07424 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cdx4Q07424 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cdx4Q07424 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Rarb-207ENSMUST00000225921 2756 ntBASIC13.84□□□□□ -0.19
Cdx4Q07424 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cdx4Q07424 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Gm20760-201ENSMUST00000179197 648 ntBASIC13.84□□□□□ -0.19
Cdx4Q07424 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdx4Q07424 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.84□□□□□ -0.19
Cdx4Q07424 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.84□□□□□ -0.19
Cdx4Q07424 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.84□□□□□ -0.19
Cdx4Q07424 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cdx4Q07424 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cdx4Q07424 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cdx4Q07424 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cdx4Q07424 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Cdx4Q07424 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdx4Q07424 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cdx4Q07424 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.83□□□□□ -0.2
Cdx4Q07424 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.83□□□□□ -0.2
Cdx4Q07424 Gm13148-201ENSMUST00000118892 745 ntBASIC13.83□□□□□ -0.2
Cdx4Q07424 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cdx4Q07424 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms