Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Nkx3-2P97503 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nkx3-2P97503 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx3-2P97503 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.92■□□□□ 0.3
Nkx3-2P97503 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx3-2P97503 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.92■□□□□ 0.3
Nkx3-2P97503 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx3-2P97503 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx3-2P97503 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx3-2P97503 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx3-2P97503 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Nkx3-2P97503 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx3-2P97503 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.92■□□□□ 0.3
Nkx3-2P97503 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.92■□□□□ 0.3
Nkx3-2P97503 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx3-2P97503 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx3-2P97503 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx3-2P97503 Zfp783-201ENSMUST00000095946 670 ntBASIC16.92■□□□□ 0.3
Nkx3-2P97503 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx3-2P97503 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nkx3-2P97503 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Gm10698-201ENSMUST00000182663 604 ntBASIC16.91■□□□□ 0.3
Nkx3-2P97503 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.91■□□□□ 0.3
Nkx3-2P97503 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nkx3-2P97503 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx3-2P97503 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Gm6576-201ENSMUST00000169678 883 ntBASIC16.9■□□□□ 0.3
Nkx3-2P97503 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nkx3-2P97503 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.89■□□□□ 0.3
Nkx3-2P97503 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Nkx3-2P97503 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nkx3-2P97503 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Nkx3-2P97503 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx3-2P97503 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.89■□□□□ 0.29
Nkx3-2P97503 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx3-2P97503 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nkx3-2P97503 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nkx3-2P97503 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx3-2P97503 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.89■□□□□ 0.29
Nkx3-2P97503 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx3-2P97503 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx3-2P97503 BC021767-201ENSMUST00000126387 1716 ntBASIC16.89■□□□□ 0.29
Nkx3-2P97503 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx3-2P97503 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx3-2P97503 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx3-2P97503 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx3-2P97503 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nkx3-2P97503 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.88■□□□□ 0.29
Nkx3-2P97503 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nkx3-2P97503 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.88■□□□□ 0.29
Nkx3-2P97503 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms