Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43cP86449 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43cP86449 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43cP86449 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim43cP86449 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43cP86449 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
Trim43cP86449 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43cP86449 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43cP86449 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43cP86449 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43cP86449 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trim43cP86449 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.53■□□□□ 0.72
Trim43cP86449 Mir2861-201ENSMUST00000175539 82 ntBASIC19.53■□□□□ 0.72
Trim43cP86449 Idnk-204ENSMUST00000226010 1898 ntBASIC19.53■□□□□ 0.72
Trim43cP86449 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43cP86449 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43cP86449 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim43cP86449 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.53■□□□□ 0.72
Trim43cP86449 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Trim43cP86449 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43cP86449 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.52■□□□□ 0.72
Trim43cP86449 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.52■□□□□ 0.72
Trim43cP86449 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43cP86449 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim43cP86449 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Trim43cP86449 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim43cP86449 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim43cP86449 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Trim43cP86449 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim43cP86449 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.51■□□□□ 0.71
Trim43cP86449 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.51■□□□□ 0.71
Trim43cP86449 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.51■□□□□ 0.71
Trim43cP86449 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim43cP86449 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43cP86449 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.5■□□□□ 0.71
Trim43cP86449 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43cP86449 Gm27275-201ENSMUST00000184318 272 ntBASIC19.5■□□□□ 0.71
Trim43cP86449 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43cP86449 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.5■□□□□ 0.71
Trim43cP86449 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43cP86449 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43cP86449 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim43cP86449 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43cP86449 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43cP86449 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43cP86449 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43cP86449 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43cP86449 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43cP86449 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trim43cP86449 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.49■□□□□ 0.71
Trim43cP86449 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43cP86449 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43cP86449 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
Trim43cP86449 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43cP86449 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43cP86449 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim43cP86449 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43cP86449 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Trim43cP86449 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43cP86449 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43cP86449 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.48■□□□□ 0.71
Trim43cP86449 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43cP86449 Gm37856-201ENSMUST00000191634 999 ntBASIC19.48■□□□□ 0.71
Trim43cP86449 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.48■□□□□ 0.71
Trim43cP86449 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.48■□□□□ 0.71
Trim43cP86449 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim43cP86449 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43cP86449 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim43cP86449 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43cP86449 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43cP86449 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Trim43cP86449 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim43cP86449 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43cP86449 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43cP86449 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43cP86449 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trim43cP86449 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.47■□□□□ 0.71
Trim43cP86449 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim43cP86449 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43cP86449 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43cP86449 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43cP86449 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43cP86449 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43cP86449 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Trim43cP86449 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim43cP86449 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43cP86449 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim43cP86449 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms