Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.04■□□□□ 0.16
SgcbP82349 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.04■□□□□ 0.16
SgcbP82349 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.04■□□□□ 0.16
SgcbP82349 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SgcbP82349 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcbP82349 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SgcbP82349 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SgcbP82349 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SgcbP82349 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SgcbP82349 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SgcbP82349 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SgcbP82349 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.03■□□□□ 0.16
SgcbP82349 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SgcbP82349 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SgcbP82349 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SgcbP82349 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SgcbP82349 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.03■□□□□ 0.16
SgcbP82349 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SgcbP82349 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SgcbP82349 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.03■□□□□ 0.16
SgcbP82349 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SgcbP82349 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SgcbP82349 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SgcbP82349 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.02■□□□□ 0.16
SgcbP82349 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.02■□□□□ 0.16
SgcbP82349 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SgcbP82349 Gm11927-201ENSMUST00000118472 759 ntBASIC16.02■□□□□ 0.16
SgcbP82349 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.02■□□□□ 0.16
SgcbP82349 Gm8520-201ENSMUST00000186517 868 ntBASIC16.02■□□□□ 0.16
SgcbP82349 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SgcbP82349 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SgcbP82349 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SgcbP82349 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SgcbP82349 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SgcbP82349 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SgcbP82349 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SgcbP82349 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SgcbP82349 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SgcbP82349 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SgcbP82349 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.01■□□□□ 0.15
SgcbP82349 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.01■□□□□ 0.15
SgcbP82349 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SgcbP82349 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SgcbP82349 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SgcbP82349 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SgcbP82349 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SgcbP82349 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SgcbP82349 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SgcbP82349 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SgcbP82349 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SgcbP82349 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Gm11249-201ENSMUST00000117071 859 ntBASIC16■□□□□ 0.15
SgcbP82349 Gm13168-201ENSMUST00000121771 632 ntBASIC16■□□□□ 0.15
SgcbP82349 Zfp783-201ENSMUST00000095946 670 ntBASIC16■□□□□ 0.15
SgcbP82349 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16■□□□□ 0.15
SgcbP82349 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16■□□□□ 0.15
SgcbP82349 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SgcbP82349 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
SgcbP82349 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SgcbP82349 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SgcbP82349 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SgcbP82349 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
SgcbP82349 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SgcbP82349 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SgcbP82349 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.98■□□□□ 0.15
SgcbP82349 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SgcbP82349 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SgcbP82349 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SgcbP82349 Gm18666-201ENSMUST00000190039 958 ntBASIC15.98■□□□□ 0.15
SgcbP82349 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SgcbP82349 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SgcbP82349 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms