Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CiitaP79621 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CiitaP79621 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CiitaP79621 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CiitaP79621 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.46■□□□□ 0.71
CiitaP79621 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CiitaP79621 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CiitaP79621 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CiitaP79621 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CiitaP79621 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CiitaP79621 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CiitaP79621 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CiitaP79621 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CiitaP79621 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CiitaP79621 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CiitaP79621 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CiitaP79621 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.45■□□□□ 0.7
CiitaP79621 Gm11643-201ENSMUST00000119578 864 ntBASIC19.45■□□□□ 0.7
CiitaP79621 Gm12382-201ENSMUST00000122005 922 ntBASIC19.45■□□□□ 0.7
CiitaP79621 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.45■□□□□ 0.7
CiitaP79621 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CiitaP79621 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CiitaP79621 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.45■□□□□ 0.7
CiitaP79621 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CiitaP79621 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CiitaP79621 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CiitaP79621 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CiitaP79621 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CiitaP79621 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CiitaP79621 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CiitaP79621 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CiitaP79621 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CiitaP79621 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CiitaP79621 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.44■□□□□ 0.7
CiitaP79621 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CiitaP79621 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CiitaP79621 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.44■□□□□ 0.7
CiitaP79621 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CiitaP79621 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CiitaP79621 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CiitaP79621 Gm37055-201ENSMUST00000191866 133 ntBASIC19.44■□□□□ 0.7
CiitaP79621 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CiitaP79621 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CiitaP79621 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CiitaP79621 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CiitaP79621 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CiitaP79621 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CiitaP79621 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.44■□□□□ 0.7
CiitaP79621 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CiitaP79621 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 Gm21814-202ENSMUST00000203277 873 ntBASIC19.43■□□□□ 0.7
CiitaP79621 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.43■□□□□ 0.7
CiitaP79621 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CiitaP79621 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.42■□□□□ 0.7
CiitaP79621 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CiitaP79621 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CiitaP79621 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.42■□□□□ 0.7
CiitaP79621 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CiitaP79621 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CiitaP79621 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CiitaP79621 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CiitaP79621 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CiitaP79621 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CiitaP79621 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CiitaP79621 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.41■□□□□ 0.7
CiitaP79621 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
CiitaP79621 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CiitaP79621 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CiitaP79621 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CiitaP79621 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CiitaP79621 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.41■□□□□ 0.7
CiitaP79621 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.4■□□□□ 0.7
CiitaP79621 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CiitaP79621 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.4■□□□□ 0.7
CiitaP79621 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CiitaP79621 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms