Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.8■□□□□ 0.28
Six5P70178 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Six5P70178 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.8■□□□□ 0.28
Six5P70178 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.8■□□□□ 0.28
Six5P70178 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Six5P70178 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six5P70178 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six5P70178 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six5P70178 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Six5P70178 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Six5P70178 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six5P70178 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six5P70178 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six5P70178 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.79■□□□□ 0.28
Six5P70178 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.79■□□□□ 0.28
Six5P70178 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.79■□□□□ 0.28
Six5P70178 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six5P70178 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.79■□□□□ 0.28
Six5P70178 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.79■□□□□ 0.28
Six5P70178 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six5P70178 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Six5P70178 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Six5P70178 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six5P70178 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six5P70178 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Six5P70178 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Six5P70178 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.78■□□□□ 0.28
Six5P70178 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Six5P70178 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Six5P70178 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Six5P70178 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six5P70178 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.78■□□□□ 0.28
Six5P70178 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.78■□□□□ 0.28
Six5P70178 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.78■□□□□ 0.28
Six5P70178 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Six5P70178 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Six5P70178 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Six5P70178 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Six5P70178 Dio3-201ENSMUST00000097228 1449 ntBASIC16.78■□□□□ 0.28
Six5P70178 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Six5P70178 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.78■□□□□ 0.28
Six5P70178 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Six5P70178 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six5P70178 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six5P70178 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Six5P70178 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Six5P70178 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Six5P70178 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.77■□□□□ 0.28
Six5P70178 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.77■□□□□ 0.28
Six5P70178 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Six5P70178 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Six5P70178 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Six5P70178 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Six5P70178 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Six5P70178 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Six5P70178 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.77■□□□□ 0.27
Six5P70178 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Six5P70178 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Six5P70178 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Six5P70178 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.76■□□□□ 0.27
Six5P70178 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Six5P70178 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Six5P70178 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six5P70178 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six5P70178 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six5P70178 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six5P70178 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Six5P70178 Gm11927-201ENSMUST00000118472 759 ntBASIC16.75■□□□□ 0.27
Six5P70178 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.75■□□□□ 0.27
Six5P70178 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms