Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm38285-201ENSMUST00000192928 922 ntBASIC15.73■□□□□ 0.11
Lsm6P62313 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.73■□□□□ 0.11
Lsm6P62313 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.73■□□□□ 0.11
Lsm6P62313 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm6P62313 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm6P62313 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Lsm6P62313 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Lsm6P62313 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Lsm6P62313 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.73■□□□□ 0.11
Lsm6P62313 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.72■□□□□ 0.11
Lsm6P62313 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm6P62313 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm6P62313 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.72■□□□□ 0.11
Lsm6P62313 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm6P62313 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Lsm6P62313 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.72■□□□□ 0.11
Lsm6P62313 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Lsm6P62313 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Lsm6P62313 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm6P62313 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm6P62313 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm6P62313 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm6P62313 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm6P62313 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Lsm6P62313 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Lsm6P62313 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Lsm6P62313 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Lsm6P62313 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.71■□□□□ 0.11
Lsm6P62313 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm6P62313 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm6P62313 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Lsm6P62313 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.7■□□□□ 0.1
Lsm6P62313 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Lsm6P62313 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Lsm6P62313 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.7■□□□□ 0.1
Lsm6P62313 Flg-201ENSMUST00000050758 1488 ntBASIC15.7■□□□□ 0.1
Lsm6P62313 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Lsm6P62313 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm6P62313 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Lsm6P62313 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm6P62313 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Lsm6P62313 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm6P62313 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm6P62313 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Lsm6P62313 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Lsm6P62313 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.69■□□□□ 0.1
Lsm6P62313 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Lsm6P62313 Zfp783-201ENSMUST00000095946 670 ntBASIC15.69■□□□□ 0.1
Lsm6P62313 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm6P62313 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Lsm6P62313 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm6P62313 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lsm6P62313 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Lsm6P62313 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.68■□□□□ 0.1
Lsm6P62313 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm6P62313 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Lsm6P62313 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm6P62313 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm6P62313 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.68■□□□□ 0.1
Lsm6P62313 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm6P62313 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Lsm6P62313 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm6P62313 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm6P62313 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.68■□□□□ 0.1
Lsm6P62313 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.68■□□□□ 0.1
Lsm6P62313 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm6P62313 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm6P62313 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm6P62313 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm6P62313 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lsm6P62313 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms