Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrch1P62046 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrch1P62046 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrch1P62046 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Lrch1P62046 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.2■□□□□ 0.98
Lrch1P62046 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrch1P62046 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lrch1P62046 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lrch1P62046 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Lrch1P62046 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC21.2■□□□□ 0.98
Lrch1P62046 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Lrch1P62046 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrch1P62046 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrch1P62046 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lrch1P62046 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrch1P62046 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lrch1P62046 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lrch1P62046 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lrch1P62046 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrch1P62046 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrch1P62046 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrch1P62046 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lrch1P62046 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.18■□□□□ 0.98
Lrch1P62046 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lrch1P62046 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lrch1P62046 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrch1P62046 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrch1P62046 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrch1P62046 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrch1P62046 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lrch1P62046 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lrch1P62046 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Lrch1P62046 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.17■□□□□ 0.98
Lrch1P62046 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 Gm7638-201ENSMUST00000121348 967 ntBASIC21.17■□□□□ 0.98
Lrch1P62046 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Lrch1P62046 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Lrch1P62046 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.17■□□□□ 0.98
Lrch1P62046 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lrch1P62046 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrch1P62046 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrch1P62046 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrch1P62046 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrch1P62046 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrch1P62046 Gm18958-201ENSMUST00000174258 762 ntBASIC21.16■□□□□ 0.98
Lrch1P62046 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC21.16■□□□□ 0.98
Lrch1P62046 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC21.16■□□□□ 0.98
Lrch1P62046 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Lrch1P62046 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrch1P62046 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lrch1P62046 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lrch1P62046 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrch1P62046 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrch1P62046 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.15■□□□□ 0.98
Lrch1P62046 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Lrch1P62046 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC21.15■□□□□ 0.98
Lrch1P62046 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrch1P62046 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrch1P62046 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21.15■□□□□ 0.98
Lrch1P62046 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC21.15■□□□□ 0.98
Lrch1P62046 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrch1P62046 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrch1P62046 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lrch1P62046 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrch1P62046 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrch1P62046 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lrch1P62046 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Lrch1P62046 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lrch1P62046 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Lrch1P62046 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lrch1P62046 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Lrch1P62046 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrch1P62046 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lrch1P62046 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lrch1P62046 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lrch1P62046 Gm27357-201ENSMUST00000183754 135 ntBASIC21.14■□□□□ 0.97
Lrch1P62046 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrch1P62046 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Lrch1P62046 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Lrch1P62046 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Lrch1P62046 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrch1P62046 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Lrch1P62046 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrch1P62046 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Lrch1P62046 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Lrch1P62046 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.97
Lrch1P62046 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Lrch1P62046 AC108858.1-201ENSMUST00000228461 1498 ntBASIC21.13■□□□□ 0.97
Lrch1P62046 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms