Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp3P58854 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tubgcp3P58854 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Tubgcp3P58854 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Tubgcp3P58854 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tubgcp3P58854 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tubgcp3P58854 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tubgcp3P58854 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tubgcp3P58854 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tubgcp3P58854 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Tubgcp3P58854 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.33■□□□□ 0.52
Tubgcp3P58854 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Tubgcp3P58854 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.33■□□□□ 0.52
Tubgcp3P58854 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tubgcp3P58854 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tubgcp3P58854 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tubgcp3P58854 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tubgcp3P58854 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tubgcp3P58854 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tubgcp3P58854 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubgcp3P58854 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubgcp3P58854 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubgcp3P58854 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Tubgcp3P58854 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubgcp3P58854 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.31■□□□□ 0.52
Tubgcp3P58854 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubgcp3P58854 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tubgcp3P58854 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tubgcp3P58854 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Tubgcp3P58854 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.31■□□□□ 0.52
Tubgcp3P58854 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tubgcp3P58854 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubgcp3P58854 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tubgcp3P58854 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubgcp3P58854 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tubgcp3P58854 Gm13148-201ENSMUST00000118892 745 ntBASIC18.29■□□□□ 0.52
Tubgcp3P58854 Gm37179-201ENSMUST00000194862 823 ntBASIC18.29■□□□□ 0.52
Tubgcp3P58854 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tubgcp3P58854 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubgcp3P58854 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubgcp3P58854 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubgcp3P58854 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubgcp3P58854 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubgcp3P58854 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tubgcp3P58854 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tubgcp3P58854 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tubgcp3P58854 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubgcp3P58854 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubgcp3P58854 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubgcp3P58854 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubgcp3P58854 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubgcp3P58854 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.28■□□□□ 0.52
Tubgcp3P58854 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.28■□□□□ 0.52
Tubgcp3P58854 Mir5133-201ENSMUST00000174955 77 ntBASIC18.28■□□□□ 0.52
Tubgcp3P58854 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.28■□□□□ 0.52
Tubgcp3P58854 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tubgcp3P58854 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tubgcp3P58854 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.28■□□□□ 0.52
Tubgcp3P58854 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubgcp3P58854 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubgcp3P58854 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tubgcp3P58854 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tubgcp3P58854 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms