Protein–RNA interactions for Protein: P57780

Actn4, Alpha-actinin-4, mousemouse

Known RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Actn4P57780 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Actn4P57780 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Actn4P57780 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Actn4P57780 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Actn4P57780 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Actn4P57780 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Actn4P57780 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.32■□□□□ 0.68
Actn4P57780 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Actn4P57780 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Actn4P57780 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Actn4P57780 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Actn4P57780 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Actn4P57780 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Actn4P57780 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Actn4P57780 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Actn4P57780 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Actn4P57780 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Actn4P57780 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Actn4P57780 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Actn4P57780 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Actn4P57780 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Actn4P57780 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Actn4P57780 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Actn4P57780 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.31■□□□□ 0.68
Actn4P57780 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Actn4P57780 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Actn4P57780 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Actn4P57780 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Actn4P57780 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Actn4P57780 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Actn4P57780 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Actn4P57780 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Actn4P57780 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Actn4P57780 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Actn4P57780 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.3■□□□□ 0.68
Actn4P57780 AV356131-201ENSMUST00000206201 750 ntBASIC19.3■□□□□ 0.68
Actn4P57780 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Actn4P57780 AC154532.1-201ENSMUST00000227860 965 ntBASIC19.3■□□□□ 0.68
Actn4P57780 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Actn4P57780 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Actn4P57780 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Actn4P57780 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Actn4P57780 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.29■□□□□ 0.68
Actn4P57780 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Actn4P57780 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Actn4P57780 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Actn4P57780 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Actn4P57780 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Actn4P57780 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Actn4P57780 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Actn4P57780 Gm13323-201ENSMUST00000120245 1151 ntBASIC19.29■□□□□ 0.68
Actn4P57780 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Actn4P57780 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.29■□□□□ 0.68
Actn4P57780 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Actn4P57780 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Actn4P57780 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Actn4P57780 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Actn4P57780 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Actn4P57780 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Actn4P57780 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Actn4P57780 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Actn4P57780 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Actn4P57780 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.28■□□□□ 0.68
Actn4P57780 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Actn4P57780 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Actn4P57780 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Actn4P57780 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Actn4P57780 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Actn4P57780 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.28■□□□□ 0.68
Actn4P57780 Gm26571-201ENSMUST00000181399 666 ntBASIC19.28■□□□□ 0.68
Actn4P57780 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.28■□□□□ 0.68
Actn4P57780 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Actn4P57780 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Actn4P57780 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Actn4P57780 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.28■□□□□ 0.68
Actn4P57780 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Actn4P57780 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.28■□□□□ 0.68
Actn4P57780 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.28■□□□□ 0.68
Actn4P57780 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Actn4P57780 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Actn4P57780 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Actn4P57780 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Actn4P57780 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Actn4P57780 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Actn4P57780 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Actn4P57780 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
Actn4P57780 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms