Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sssca1P56873 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sssca1P56873 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sssca1P56873 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sssca1P56873 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sssca1P56873 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sssca1P56873 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sssca1P56873 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sssca1P56873 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.52□□□□□ -0.08
Sssca1P56873 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sssca1P56873 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sssca1P56873 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sssca1P56873 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.52□□□□□ -0.09
Sssca1P56873 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sssca1P56873 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sssca1P56873 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sssca1P56873 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sssca1P56873 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sssca1P56873 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sssca1P56873 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Tgds-204ENSMUST00000228543 1594 ntBASIC14.51□□□□□ -0.09
Sssca1P56873 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sssca1P56873 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sssca1P56873 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Sssca1P56873 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Sssca1P56873 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sssca1P56873 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Sssca1P56873 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.51□□□□□ -0.09
Sssca1P56873 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sssca1P56873 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sssca1P56873 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Sssca1P56873 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sssca1P56873 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.5□□□□□ -0.09
Sssca1P56873 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sssca1P56873 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sssca1P56873 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.5□□□□□ -0.09
Sssca1P56873 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sssca1P56873 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.5□□□□□ -0.09
Sssca1P56873 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.5□□□□□ -0.09
Sssca1P56873 Gm43017-201ENSMUST00000198296 752 ntBASIC14.5□□□□□ -0.09
Sssca1P56873 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sssca1P56873 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sssca1P56873 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sssca1P56873 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sssca1P56873 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sssca1P56873 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sssca1P56873 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Sssca1P56873 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sssca1P56873 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Sssca1P56873 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.5□□□□□ -0.09
Sssca1P56873 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Sssca1P56873 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Sssca1P56873 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sssca1P56873 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sssca1P56873 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sssca1P56873 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sssca1P56873 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sssca1P56873 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Sssca1P56873 Gm43060-201ENSMUST00000200621 289 ntBASIC14.49□□□□□ -0.09
Sssca1P56873 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sssca1P56873 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sssca1P56873 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.49□□□□□ -0.09
Sssca1P56873 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sssca1P56873 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Sssca1P56873 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Sssca1P56873 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Sssca1P56873 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.49□□□□□ -0.09
Sssca1P56873 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sssca1P56873 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sssca1P56873 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sssca1P56873 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sssca1P56873 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.48□□□□□ -0.09
Sssca1P56873 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.48□□□□□ -0.09
Sssca1P56873 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sssca1P56873 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Sssca1P56873 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sssca1P56873 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.48□□□□□ -0.09
Sssca1P56873 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sssca1P56873 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Sssca1P56873 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.48□□□□□ -0.09
Sssca1P56873 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.48□□□□□ -0.09
Sssca1P56873 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.48□□□□□ -0.09
Sssca1P56873 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14.48□□□□□ -0.09
Sssca1P56873 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sssca1P56873 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sssca1P56873 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sssca1P56873 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sssca1P56873 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms